Pyxis is a software for ion mobility mass spectrometry imaging (IMS-MSI), that supports both untargeted and targeted data analysis, distributed as desktop application.
The workflow supported by Pyxis covers all the steps required for IMS-MSI data analysis: raw data processing, histological coregistration, image and mobilogram visualization, manual drawing or importing of regions annotated by pathologists, image visualization, exploratory data analysis (segmentation, PCA, colocalization), automatic report generation, a variety of univariate and multivariate image and spectral analysis tools, and automated metabolites annotation, including CCS- and MS/MS-based identification. A number of functions to export results in open format are also available.
Pyxis Training documents
- Tutorial_Pyxis_01 Getting started
- Tutorial_Pyxis_02 Create and Manage databases for identification
- Tutorial_Pyxis_03 Statistical data analysis
Videos:
- Ion Mobility MSI: Adding A New Dimension To Spatial Metabolomics
- Practical Applications for Drug Discovery 2020 Webinar. Sara Tortorella, Jens Soltwisch
- Pyxis MSI: for multi-purpose MSI data analysis
- LipostarMSI: for MSI lipidomics data analysis
- Oniro: for HTS rapifleX data analysis
- Lipostar: for LC-MS lipidomics
- MARS: for LC-MS metabolomics
- Action: for affinity measurement
